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     | 
      
        
          get_data_col(data,
        param_arr,
        param) 
      Return a one-dimensional array with the column of data corresponding 
      to the specified parameter. | 
          
            source code
            
           | 
         
       
      
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     | 
      
        
          merge_files(data,
        param_arr,
        writefile) 
      Merge a list of files and create a 'chain' column that labels each 
      file. | 
          
            source code
            
           | 
         
       
      
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    | 
       
     | 
      
        
          kstest(pos_samples,
        param_arr,
        outdir) 
      Compute p-value for each parameter in param_arr for each combination 
      of runs in pos_samples and histogram results. | 
          
            source code
            
           | 
         
       
      
     | 
  
    | 
       
     | 
      
        
          gelman_rubin(pos_samples,
        param_arr,
        outdir) 
      Compute Gelman-Rubin R-statistic for each parameter in param_arr. | 
          
            source code
            
           | 
         
       
      
     | 
  
    | 
       
     | 
      
        
          compare_maxl(pos_samples,
        param_arr) 
      Find maximum value for logl for each run and compute maximum 
      difference. | 
          
            source code
            
           | 
         
       
      
     | 
  
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